python /softwares/ptools_1.1/PyAttract/reduce.py --prot --ff2 /home/server/jobs/attract/42b1180f14/1FIN_c_r.pdb 1> /home/server/jobs/attract/42b1180f14/1FIN_c_r.red 2> /home/server/jobs/attract/42b1180f14/1FIN_c_r.log
python /softwares/ptools_1.1/PyAttract/reduce.py --prot --ff2 /home/server/jobs/attract/42b1180f14/1FIN_c_l.pdb 1> /home/server/jobs/attract/42b1180f14/1FIN_c_l.red 2> /home/server/jobs/attract/42b1180f14/1FIN_c_l.log
python /softwares/ptools_1.1/PyAttract/attract2g.py -r /home/server/jobs/attract/42b1180f14/1FIN_c_r.red -l /home/server/jobs/attract/42b1180f14/1FIN_c_l.red --ff2 -s --ref /home/server/jobs/attract/42b1180f14/1FIN_c_l.red --sasa 1> docking.att 2> docking.log
python /softwares/ptools_1.1/PyAttract/extract.py docking.att /home/server/jobs/attract/42b1180f14/1FIN_c_l.pdb 1 1 > /home/server/jobs/attract/42b1180f14/1FIN_c_l_docked.pdb
